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4.3: DNA Structure and Replication

Last updated

Mar 6, 2021
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- 4.2: DNA, the Genetic Material
- 4.4: RNA

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f-d:0867f50f925ace9b82d0435730062864bc8858c44ce1b174592d1a40 IMAGE_TINY IMAGE_TINY.1

How do these four structures form DNA?

In an extremely elegant model, that's how. As you will soon see, the model predicts how the DNA sequence can code for proteins, and how the molecule can be replicated.

DNA Structure and Replication

Chargaff's Rules

Other important discoveries about DNA were made in the mid-1900s by Erwin Chargaff. He studied DNA from many different species. He was especially interested in the four different nitrogen bases of DNA: adenine (A), guanine (G), cytosine (C), and thymine (T) (see Figure below). Chargaff found that concentrations of the four bases differed from one species to another. However, within each species, the concentration of adenine was always about the same as the concentration of thymine. The same was true of the concentrations of guanine and cytosine. These observations came to be known as Chargaff’s rules. The significance of the rules would not be revealed until the structure of DNA was discovered.

Shows the four nitrogen bases that make up the DNA of all species

Nitrogen Bases in DNA. The DNA of all species has the same four nitrogen bases.

The Double Helix

After DNA was found to be the genetic material, scientists wanted to learn more about it. James Watson and Francis Crick are usually given credit for discovering that DNA has adouble helix shape, like a spiral staircase (see Figure below). The discovery was based on the prior work of Rosalind Franklin and other scientists, who had used X rays to learn more about DNA’s structure. Franklin and these other scientists have not always been given credit for their contributions. You can learn more about Franklin’s work by watching the video at this link: http://www.youtube.com/watch?v=s3whouvZYG8 (7:47).

Compares the shape of a DNA molecule with a spiral staircase

The DNA molecule has a double helix shape. This is the same basic shape as a spiral staircase. Do you see the resemblance? Which parts of the DNA molecule are like the steps of the spiral staircase?

The double helix shape of DNA, together with Chargaff’s rules, led to a better understanding of DNA. DNA, as a nucleic acid, is made from nucleotide monomers, and the DNA double helix consists of two polynucleotide chains. Each nucleotide consists of a sugar (deoxyribose), a phosphate group, and a nitrogen-containing base (A, C, G, or T).

Scientists concluded that bonds (hydrogen bonds) between complementary bases hold together the two polynucleotide chains of DNA. Adenine always bonds with its complementary base, thymine. Cytosine always bonds with its complementary base, guanine. If you look at the nitrogen bases in Figure above, you will see why. Adenine and guanine have a two-ring structure. Cytosine and thymine have just one ring. If adenine were to bind with guanine and cytosine with thymine, the distance between the two DNA chains would be variable. However, when a one-ring molecule binds with a two-ring molecule, the distance between the two chains is kept constant. This maintains the uniform shape of the DNA double helix. These base pairs (A-T or G-C) stick into the middle of the double helix, forming, in essence, the steps of the spiral staircase.

DNA Replication

Knowledge of DNA’s structure helped scientists understand how DNA replicates. DNA replication is the process in which DNA is copied. It occurs during the synthesis (S) phase of the eukaryotic cell cycle. DNA replication begins when an enzyme, DNA helicase, breaks the bonds between complementary bases in DNA (see Figure below). This exposes the bases inside the molecule so they can be “read” by another enzyme, DNA polymerase, and used to build two new DNA strands with complementary bases, also by DNA polymerase. The two daughter molecules that result each contain one strand from the parent molecule and one new strand that is complementary to it. As a result, the two daughter molecules are both identical to the parent molecule. DNA replication is a semi-conservative process because half of the parent DNA molecule is conserved in each of the two daughter DNA molecules.

The process of DNA replication is actually much more complex than this simple summary. You can see a detailed animation of the process at this link: http://www.youtube.com/watch?v=-mtLXpgjHL0 (2:05).

A simple illustration of the DNA replication process

DNA Replication. DNA replication is a semi-conservative process. Half of the parent DNA molecule is conserved in each of the two daughter DNA molecules.

Summary

Chargaff's rules state that the amount of A is similar to the amount of T, and the amount of G is similar to the amount of C.
Watson and Crick discovered that DNA has a double helix shape, consisting of two polynucleotide chains held together by bonds between complementary bases.
DNA replication is semi-conservative: half of the parent DNA molecule is conserved in each of the two daughter DNA molecules.

Making Connections

Explore More

Use these resources to answer the questions that follow.

Explore More I

http://www.hippocampus.org/Biology → Non-Majors Biology → Search: DNA Structure and Function

Describe the structure of DNA.
The phrase ‘‘sides of the ladder’’ refers to what structure(s)?
Why is there a specific pairing pattern among the bases?
Why are the two strands of the double helix ‘‘perfect and specific compliments’’?
List three functions of DNA that are based on its structure.

Explore More II

http://www.hippocampus.org/Biology → Non-Majors Biology → Search: Replication

Why must DNA be replicated?
When does replication occur?
Describe the first step of replication.
Why is each strand of DNA able to serve as a template for replication?
Explain the meaning of semi-conservative replication.

Explore More III

DNA Replication at http://johnkyrk.com/DNAreplic.swf.

Build a DNA Molecule at learn.genetics.utah.edu/conte.../dna/builddna/.

Review

What are Chargaff’s rules?
Identify the structure of the DNA molecule.
What are nucleotides? What makes up a nucleotide?
Why is DNA replication said to be semi-conservative?
Create a diagram that shows how DNA replication occurs.
What is complementary base pairing? Explain why complementary base pairing is necessary to maintain the double helix shape of the DNA molecule.