5.1: Species Diversity

Strictly speaking, species diversity is the number of different species in a particular area (species richness) weighted by some measure of abundance such as number of individuals or biomass. However, it is common for conservation biologists to speak of species diversity even when they are actually referring to species richness.

Another measure of species diversity is the species evenness, which is the relative abundance with which each species is represented in an area. An ecosystem where all the species are represented by the same number of individuals has high species evenness. An ecosystem where some species are represented by many individuals, and other species are represented by very few individuals has a low species evenness. Table shows the abundance of species (number of individuals per hectare) in three ecosystems and gives the measures of species richness (S), evenness (E), and the Shannon diversity index (H).

Shannon's diversity index \(H=−∑ρ_iln(ρ_i)\)

• \(ρ_i\) is the proportion of the total number of specimens ii expressed as a proportion of the total number of species for all species in the ecosystem. The product of \(ρ_iln(ρ_i)\) for each species in the ecosystem is summed, and multiplied by \(−1\) to give \(H\). The species evenness index (\(E\)) is calculated as \(E=\frac{H}{H_{max}}\).
• \(H_{max}\) is the maximum possible value of \(H\), and is equivalent to \(ln(S)\). Thus \(E=\frac{H}{ln(S)}\)

See Gibbs et al., 1998: p157 and Beals et al. (2000) for discussion and examples. Magurran (1988) also gives discussion of the methods of quantifying diversity.

In Table, ecosystem A shows the greatest diversity in terms of species richness. However, ecosystem B could be described as being richer insofar as most species present are more evenly represented by numbers of individuals; thus the species evenness (E) value is larger. This example also illustrates a condition that is often seen in tropical ecosystems, where disturbance of the ecosystem causes uncommon species to become even less common, and common species to become even more common. Disturbance of ecosystem B may produce ecosystem C, where the uncommon species 3 has become less common, and the relatively common species 1 has become more common. There may even be an increase in the number of species in some disturbed ecosystems but, as noted above, this may occur with a concomitant reduction in the abundance of individuals or local extinction of the rarer species.

Species richness and species evenness are probably the most frequently used measures of the total biodiversity of a region. Species diversity is also described in terms of the phylogenetic diversity, or evolutionary relatedness, of the species present in an area. For example, some areas may be rich in closely related taxa, having evolved from a common ancestor that was also found in that same area, whereas other areas may have an array of less closely related species descended from different ancestors (see further comments in the section on Species diversity as a surrogate for global biodiversity).

To count the number of species, we must define what constitutes a species. There are several competing theories, or "species concepts" (Mayden, 1997). The most widely accepted are the morphological species concept, the biological species concept, and the phylogenetic species concept.

Although the morphological species concept (MSC) is largely outdated as a theoretical definition, it is still widely used. According to this concept: species are the smallest groups that are consistently and persistently distinct, and distinguishable by ordinary means. (Cronquist, 1978). In other words, morphological species concept states that "a species is a community, or a number of related communities, whose distinctive morphological characters are, in the opinion of a competent systematist, sufficiently definite to entitle it, or them, to a specific name" (Regan, 1926: 75).

The biological species concept (BSC), as described by Mayr and Ashlock (1991), states that "a species is a group of interbreeding natural populations that is reproductively isolated from other such groups".

According to the phylogenetic species concept (PSC), as defined by Cracraft (1983), a species : "is the smallest diagnosable cluster of individual organism [that is, the cluster of organisms are identifiably distinct from other clusters] within which there is a parental pattern of ancestry and descent". These concepts are not congruent, and considerable debate exists about the advantages and disadvantages of all existing species concepts (for further discussion, see the module on Macroevolution: essentials of systematics and taxonomy).

In practice, systematists usually group specimens together according to shared features (genetic, morphological, physiological). When two or more groups show different sets of shared characters, and the shared characters for each group allow all the members of that group to be distinguished relatively easily and consistently from the members of another group, then the groups are considered different species. This approach relies on the objectivity of the phylogenetic species concept (i.e., the use of intrinsic, shared, characters to define or diagnose a species) and applies it to the practicality of the morphological species concept, in terms of sorting specimens into groups (Kottelat, 1995, 1997).

Despite their differences, all species concepts are based on the understanding that there are parameters that make a species a discrete and identifiable evolutionary entity. If populations of a species become isolated, either through differences in their distribution (i.e., geographic isolation) or through differences in their reproductive biology (i.e., reproductive isolation), they can diverge, ultimately resulting in speciation. During this process, we expect to see distinct populations representing incipient species - species in the process of formation. Some researchers may describe these as subspecies or some other sub-category, according to the species concept used by these researchers. However, it is very difficult to decide when a population is sufficiently different from other populations to merit its ranking as a subspecies. For these reasons, subspecific and infrasubspecific ranks may become extremely subjective decisions of the degree of distinctiveness between groups of organisms (Kottelat, 1997).

An evolutionary significant unit (ESU) is defined, in conservation biology, as a group of organisms that has undergone significant genetic divergence from other groups of the same species. According to Ryder, 1986 identification of ESUs requires the use of natural history information, range and distribution data, and results from analyses of morphometrics, cytogenetics, allozymes and nuclear and mitochondrial DNA. In practice, many ESUs are based on only a subset of these data sources. Nevertheless, it is necessary to compare data from different sources (e.g., analyses of distribution, morphometrics, and DNA) when establishing the status of ESUs. If the ESUs are based on populations that are sympatric or parapatric then it is particularly important to give evidence of significant genetic distance between those populations.

ESUs are important for conservation management because they can be used to identify discrete components of the evolutionary legacy of a species that warrant conservation action. Nevertheless, in evolutionary terms and hence in many systematic studies, species are recognized as the minimum identifiable unit of biodiversity above the level of a single organism (Kottelat, 1997). Thus there is generally more systematic information available for species diversity than for subspecific categories and for ESUs. Consequently, estimates of species diversity are used more frequently as the standard measure of overall biodiversity of a region.

Taxon	Taxon Common Name	Number of species described*	N as percentage of total number of described species*
Bacteria	true bacteria	9021	0.5
Archaea	archaebacteria	259	0.01
Bryophyta	mosses	15000	0.9
Lycopodiophyta	clubmosses	1275	0.07
Filicophyta	ferns	9500	0.5
Coniferophyta	conifers	601	0.03
Magnoliophyta	flowering plants	233885	13.4
Fungi	fungi	100800	5.8
"Porifera"	sponges	10000	0.6
Cnidaria	cnidarians	9000	0.5
Rotifera	rotifers	1800	0.1
Platyhelminthes	flatworms	13780	0.8
Mollusca	mollusks	117495	6.7
Annelida	annelid worms	14360	0.8
Nematoda	nematode worms	20000	1.1
Arachnida	arachnids	74445	4.3
Crustacea	crustaceans	38839	2.2
Insecta	insects	827875	47.4
Echinodermata	echinoderms	6000	0.3
Chondrichthyes	cartilaginous fishes	846	0.05
Actinopterygii	ray-finned bony fishes	23712	1.4
Lissamphibia	living amphibians	4975	0.3
Mammalia	mammals	4496	0.3
Chelonia	living turtles	290	0.02
Squamata	lizards and snakes	6850	0.4
Aves	birds	9672	0.6
Other		193075	11.0

Table \(\PageIndex{1}\) : Estimated Numbers of Described Species, Based on Lecointre and Guyader (2001) * The total number of described species is assumed to be 1,747,851. This figure, and the numbers of species for taxa are taken from LeCointre and Guyader (2001).

Glossary

Species diversity

the number of different species in a particular area (i.e., species richness) weighted by some measure of abundance such as number of individuals or biomass.

Species richness

the number of different species in a particular area

Species evenness

the relative abundance with which each species are represented in an area.

Phylogenetic diversity

the evolutionary relatedness of the species present in an area.

Morphological species concept

species are the smallest natural populations permanently separated from each other by a distinct discontinuity in the series of biotype (Du Rietz, 1930; Bisby and Coddington, 1995).

Biological species concept

a species is a group of interbreeding natural populations unable to successfully mate or reproduce with other such groups, and which occupies a specific niche in nature (Mayr, 1982; Bisby and Coddington, 1995).

Phylogenetic species concept

a species is the smallest group of organisms that is diagnosably [that is, identifiably] distinct from other such clusters and within which there is a parental pattern of ancestry and descent (Cracraft, 1983; Bisby and Coddington, 1995).

Evolutionary significant unit

a group of organisms that has undergone significant genetic divergence from other groups of the same species. Identification of ESUs is based on natural history information, range and distribution data, and results from analyses of morphometrics, cytogenetics, allozymes and nuclear and mitochondrial DNA. Concordance of those data, and the indication of significant genetic distance between sympatric groups of organisms, are critical for establishing an ESU.

Ecosystem

a community plus the physical environment that it occupies at a given time.

Sympatric

occupying the same geographic area.

Parapatric

occupying contiguous but not overlapping ranges.