E46: PYP
- Page ID
- 4245
\( \newcommand{\vecs}[1]{\overset { \scriptstyle \rightharpoonup} {\mathbf{#1}} } \)
\( \newcommand{\vecd}[1]{\overset{-\!-\!\rightharpoonup}{\vphantom{a}\smash {#1}}} \)
\( \newcommand{\id}{\mathrm{id}}\) \( \newcommand{\Span}{\mathrm{span}}\)
( \newcommand{\kernel}{\mathrm{null}\,}\) \( \newcommand{\range}{\mathrm{range}\,}\)
\( \newcommand{\RealPart}{\mathrm{Re}}\) \( \newcommand{\ImaginaryPart}{\mathrm{Im}}\)
\( \newcommand{\Argument}{\mathrm{Arg}}\) \( \newcommand{\norm}[1]{\| #1 \|}\)
\( \newcommand{\inner}[2]{\langle #1, #2 \rangle}\)
\( \newcommand{\Span}{\mathrm{span}}\)
\( \newcommand{\id}{\mathrm{id}}\)
\( \newcommand{\Span}{\mathrm{span}}\)
\( \newcommand{\kernel}{\mathrm{null}\,}\)
\( \newcommand{\range}{\mathrm{range}\,}\)
\( \newcommand{\RealPart}{\mathrm{Re}}\)
\( \newcommand{\ImaginaryPart}{\mathrm{Im}}\)
\( \newcommand{\Argument}{\mathrm{Arg}}\)
\( \newcommand{\norm}[1]{\| #1 \|}\)
\( \newcommand{\inner}[2]{\langle #1, #2 \rangle}\)
\( \newcommand{\Span}{\mathrm{span}}\) \( \newcommand{\AA}{\unicode[.8,0]{x212B}}\)
\( \newcommand{\vectorA}[1]{\vec{#1}} % arrow\)
\( \newcommand{\vectorAt}[1]{\vec{\text{#1}}} % arrow\)
\( \newcommand{\vectorB}[1]{\overset { \scriptstyle \rightharpoonup} {\mathbf{#1}} } \)
\( \newcommand{\vectorC}[1]{\textbf{#1}} \)
\( \newcommand{\vectorD}[1]{\overrightarrow{#1}} \)
\( \newcommand{\vectorDt}[1]{\overrightarrow{\text{#1}}} \)
\( \newcommand{\vectE}[1]{\overset{-\!-\!\rightharpoonup}{\vphantom{a}\smash{\mathbf {#1}}}} \)
\( \newcommand{\vecs}[1]{\overset { \scriptstyle \rightharpoonup} {\mathbf{#1}} } \)
\( \newcommand{\vecd}[1]{\overset{-\!-\!\rightharpoonup}{\vphantom{a}\smash {#1}}} \)
\(\newcommand{\avec}{\mathbf a}\) \(\newcommand{\bvec}{\mathbf b}\) \(\newcommand{\cvec}{\mathbf c}\) \(\newcommand{\dvec}{\mathbf d}\) \(\newcommand{\dtil}{\widetilde{\mathbf d}}\) \(\newcommand{\evec}{\mathbf e}\) \(\newcommand{\fvec}{\mathbf f}\) \(\newcommand{\nvec}{\mathbf n}\) \(\newcommand{\pvec}{\mathbf p}\) \(\newcommand{\qvec}{\mathbf q}\) \(\newcommand{\svec}{\mathbf s}\) \(\newcommand{\tvec}{\mathbf t}\) \(\newcommand{\uvec}{\mathbf u}\) \(\newcommand{\vvec}{\mathbf v}\) \(\newcommand{\wvec}{\mathbf w}\) \(\newcommand{\xvec}{\mathbf x}\) \(\newcommand{\yvec}{\mathbf y}\) \(\newcommand{\zvec}{\mathbf z}\) \(\newcommand{\rvec}{\mathbf r}\) \(\newcommand{\mvec}{\mathbf m}\) \(\newcommand{\zerovec}{\mathbf 0}\) \(\newcommand{\onevec}{\mathbf 1}\) \(\newcommand{\real}{\mathbb R}\) \(\newcommand{\twovec}[2]{\left[\begin{array}{r}#1 \\ #2 \end{array}\right]}\) \(\newcommand{\ctwovec}[2]{\left[\begin{array}{c}#1 \\ #2 \end{array}\right]}\) \(\newcommand{\threevec}[3]{\left[\begin{array}{r}#1 \\ #2 \\ #3 \end{array}\right]}\) \(\newcommand{\cthreevec}[3]{\left[\begin{array}{c}#1 \\ #2 \\ #3 \end{array}\right]}\) \(\newcommand{\fourvec}[4]{\left[\begin{array}{r}#1 \\ #2 \\ #3 \\ #4 \end{array}\right]}\) \(\newcommand{\cfourvec}[4]{\left[\begin{array}{c}#1 \\ #2 \\ #3 \\ #4 \end{array}\right]}\) \(\newcommand{\fivevec}[5]{\left[\begin{array}{r}#1 \\ #2 \\ #3 \\ #4 \\ #5 \\ \end{array}\right]}\) \(\newcommand{\cfivevec}[5]{\left[\begin{array}{c}#1 \\ #2 \\ #3 \\ #4 \\ #5 \\ \end{array}\right]}\) \(\newcommand{\mattwo}[4]{\left[\begin{array}{rr}#1 \amp #2 \\ #3 \amp #4 \\ \end{array}\right]}\) \(\newcommand{\laspan}[1]{\text{Span}\{#1\}}\) \(\newcommand{\bcal}{\cal B}\) \(\newcommand{\ccal}{\cal C}\) \(\newcommand{\scal}{\cal S}\) \(\newcommand{\wcal}{\cal W}\) \(\newcommand{\ecal}{\cal E}\) \(\newcommand{\coords}[2]{\left\{#1\right\}_{#2}}\) \(\newcommand{\gray}[1]{\color{gray}{#1}}\) \(\newcommand{\lgray}[1]{\color{lightgray}{#1}}\) \(\newcommand{\rank}{\operatorname{rank}}\) \(\newcommand{\row}{\text{Row}}\) \(\newcommand{\col}{\text{Col}}\) \(\renewcommand{\row}{\text{Row}}\) \(\newcommand{\nul}{\text{Nul}}\) \(\newcommand{\var}{\text{Var}}\) \(\newcommand{\corr}{\text{corr}}\) \(\newcommand{\len}[1]{\left|#1\right|}\) \(\newcommand{\bbar}{\overline{\bvec}}\) \(\newcommand{\bhat}{\widehat{\bvec}}\) \(\newcommand{\bperp}{\bvec^\perp}\) \(\newcommand{\xhat}{\widehat{\xvec}}\) \(\newcommand{\vhat}{\widehat{\vvec}}\) \(\newcommand{\uhat}{\widehat{\uvec}}\) \(\newcommand{\what}{\widehat{\wvec}}\) \(\newcommand{\Sighat}{\widehat{\Sigma}}\) \(\newcommand{\lt}{<}\) \(\newcommand{\gt}{>}\) \(\newcommand{\amp}{&}\) \(\definecolor{fillinmathshade}{gray}{0.9}\)Published Works
E46Q
- Nakamura, Ryosuke, Norio Hamada, Kenta Abe, and Masayuki Yoshizawa. "Ultrafast hydrogen-bonding dynamics in the electronic excited state of photoactive yellow protein revealed by femtosecond stimulated Raman spectroscopy." The Journal of Physical Chemistry B 116, no. 51 (2012): 14768-14775. pdf (checked)
- Changenet-Barret, Pascale, Pascal Plaza, Monique M. Martin, Haik Chosrowjan, Seiji Taniguchi, Noboru Mataga, Yasushi Imamoto, and Mikio Kataoka. "Structural Effects on the Ultrafast Photoisomerization of Photoactive Yellow Protein. Transient Absorption Spectroscopy of Two Point Mutants†." The Journal of Physical Chemistry C 113, no. 27 (2009): 11605-11613. pdf (checked)
- Devanathan, Savitha, Su Lin, Michael A. Cusanovich, Neal Woodbury, and Gordon Tollin. "Early intermediates in the photocycle of the Glu46Gln mutant of photoactive yellow protein: femtosecond spectroscopy." Biophysical journal 79, no. 4 (2000): 2132-2137. pdf (checked)
- Nakamura, R., N. Hamada, K. Abe, and M. Yoshizawa. "Structural Evolution in Photoactive Yellow Protein Studied by Femtosecond Stimulated Raman Spectroscopy." In EPJ Web of Conferences, vol. 41, p. 07008. EDP Sciences, 2013. pdf (checked)
- Zhu, Jingyi, Laura Paparelli, Marijke Hospes, Jos Arents, John TM Kennis, Ivo HM van Stokkum, Klaas J. Hellingwerf, and Marie Louise Groot. "Photoionization and electron radical recombination dynamics in photoactive yellow protein investigated by ultrafast spectroscopy in the visible and near-infrared spectral region." The Journal of Physical Chemistry B 117, no. 38 (2013): 11042-11048. pdf (A citation correction has been issued for this paper, pdf) (checked)
- Nakamura, Ryosuke, Norio Hamada, Hideki Ichida, Fumio Tokunaga, and Yasuo Kanematsu. "Transient vibronic structure in ultrafast fluorescence spectra of photoactive yellow protein." Photochemistry and photobiology 84, no. 4 (2008): 937-940. pdf (checked)
- Van Wilderen, L. J. G. W., M. A. Van der Horst, I. H. M. Van Stokkum, K. J. Hellingwerf, R. Van Grondelle, and M. L. Groot. "Ultrafast infrared spectroscopy reveals a key step for successful entry into the photocycle for photoactive yellow protein." Proceedings of the National Academy of Sciences 103, no. 41 (2006): 15050-15055. pdf (checked)
- Chosrowjan, Haik, Seiji Taniguchi, Noboru Mataga, Masashi Unno, Seigo Yamauchi, Norio Hamada, Masato Kumauchi, and Fumio Tokunaga. "Low-frequency vibrations and their role in ultrafast photoisomerization reaction dynamics of photoactive yellow protein." The Journal of Physical Chemistry B 108, no. 8 (2004): 2686-2698. pdf (checked)
- Mataga, Noboru, Haik Chosrowjan, Seiji Taniguchi, Norio Hamada, Fumio Tokunaga, Yasushi Imamoto, and Mikio Kataoka. "Ultrafast photoreactions in protein nanospaces as revealed by fs fluorescence dynamics measurements on photoactive yellow protein and related systems." Physical Chemistry Chemical Physics 5, no. 11 (2003): 2454-2460. pdf (checked)
- Mataga, Noboru, Haik Chosrowjan, Yutaka Shibata, Yasushi Imamoto, Mikio Kataoka, and Fumio Tokunaga. "Ultrafast photoinduced reaction dynamics of photoactive yellow protein (PYP): observation of coherent oscillations in the femtosecond fluorescence decay dynamics." Chemical physics letters 352, no. 3 (2002): 220-225. pdf (checked)
- Mataga, Noboru, Haik Chosrowjan, Yutaka Shibata, Yasushi Imamoto, and Fumio Tokunaga. "Effects of modification of protein nanospace structure and change of temperature on the femtosecond to picosecond fluorescence dynamics of photoactive yellow protein." The Journal of Physical Chemistry B 104, no. 21 (2000): 5191-5199. pdf (checked)
- Chosrowjan, Haik, Noboru Mataga, Yutaka Shibata, Yasushi Imamoto, and Fumio Tokunaga. "Environmental effects on the femtosecond-picosecond fluorescence dynamics of photoactive yellow protein: chromophores in aqueous solutions and in protein nanospaces modified by site-directed mutagenesis." The Journal of Physical Chemistry B 102, no. 40 (1998): 7695-7698. pdf (checked)
- Kennis, John TM, and Marie-Louise Groot. "Ultrafast spectroscopy of biological photoreceptors." Current opinion in structural biology 17, no. 5 (2007): 623-630. pdf (checked)
- Mataga, Noboru, Haik Chosrowjan, and Seiji Taniguchi. "Investigations into the dynamics and mechanisms of ultrafast photoinduced reactions taking place in photoresponsive protein nanospaces (PNS)." Journal of Photochemistry and Photobiology C: Photochemistry Reviews 5, no. 2 (2004): 155-168. pdf (checked)
E46A
-
Devanathan, Savitha, Su Lin, Michael A. Cusanovich, Neal Woodbury, and Gordon Tollin. "Early photocycle kinetic behavior of the E46A and Y42F mutants of photoactive yellow protein: femtosecond spectroscopy."Biophysical journal 81, no. 4 (2001): 2314-2319.pdf