Computational analysis

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Jun 3, 2019
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- Halorhodospira halophila
- E46: PYP

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Koike, Kana, Kazutomo Kawaguchi, and Takahisa Yamato. "Stress tensor analysis of the protein quake of photoactive yellow protein." Physical Chemistry Chemical Physics 10, no. 10 (2008): 1400-1405. pdf (checked)
Yamada, Atsushi, Takakazu Ishikura, and Takahisa Yamato. "Direct measure of functional importance visualized atom‐by‐atom for photoactive yellow protein: Application to photoisomerization reaction." Proteins: Structure, Function, and Bioinformatics 55, no. 4 (2004): 1070-1077. pdf (checked)
Yu, Xin, and David M. Leitner. "Chromophore vibrations during isomerization of photoactive yellow protein: analysis of normal modes and energy transfer." Chemical physics letters 391, no. 1 (2004): 181-186. pdf (checked)

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