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- https://bio.libretexts.org/Bookshelves/Biochemistry/Fundamentals_of_Biochemistry_(Jakubowski_and_Flatt)/01%3A_Unit_I-_Structure_and_Catalysis/01%3A_The_Foundations_of_Biochemistry/1.01%3A_Cellular_FoundationsThe page introduces biochemistry fundamentals from a chemical perspective, focusing on key cellular components and their chemical processes. It outlines the basic structure of prokaryotic and eukaryot...The page introduces biochemistry fundamentals from a chemical perspective, focusing on key cellular components and their chemical processes. It outlines the basic structure of prokaryotic and eukaryotic cells, highlighting the importance of genetic material, ribosomes, and the lipid bilayer. The text delves into the four classes of biomolecules including lipids, proteins, nucleic acids, and carbohydrates, and their roles in cellular metabolism.
- https://bio.libretexts.org/Bookshelves/Biochemistry/Fundamentals_of_Biochemistry_(Jakubowski_and_Flatt)/01%3A_Unit_I-_Structure_and_Catalysis/06%3A_Enzyme_Activity/6.05A%3A_Enzyme_Reaction_Mechanisms_-_Arrow_PushingThis page outlines learning goals for biochemistry students on enzyme catalysis, covering mechanisms and roles of enzymes, particularly focusing on serine proteases like chymotrypsin and their catalyt...This page outlines learning goals for biochemistry students on enzyme catalysis, covering mechanisms and roles of enzymes, particularly focusing on serine proteases like chymotrypsin and their catalytic strategies. It details the function of magnesium in phosphate transfer, the classification of proteases, and the mechanisms of specific enzymes like carboxypeptidase A and lysozyme.
- https://bio.libretexts.org/Bookshelves/Biochemistry/Fundamentals_of_Biochemistry_(Jakubowski_and_Flatt)/03%3A_Unit_III-_Information_Pathway/26%3A_Protein_Metabolism/26.03%3A_Translational_Regulation_and_Protein_DegradationThis page provides an extensive overview of the regulation of translation and protein degradation, focusing on translational regulation, ribosome structure heterogeneity, mRNA sequences, nascent pepti...This page provides an extensive overview of the regulation of translation and protein degradation, focusing on translational regulation, ribosome structure heterogeneity, mRNA sequences, nascent peptide effects, and the proteasome system.
- https://bio.libretexts.org/Bookshelves/Biochemistry/Fundamentals_of_Biochemistry_(Jakubowski_and_Flatt)/01%3A_Unit_I-_Structure_and_Catalysis/02%3A_Water_and_its_Role_in_Life/2.04%3A_Solubility_in_an_aqueous_world_-_noncovalent_interactions_in_depthThe page provides an in-depth exploration of noncovalent interactions within biochemistry, touching on hydrogen bonding, ionic interactions, van der Waals forces, and more. It connects these interacti...The page provides an in-depth exploration of noncovalent interactions within biochemistry, touching on hydrogen bonding, ionic interactions, van der Waals forces, and more. It connects these interactions to water???s properties, explaining how they influence solubility and biological structures such as protein folding.
- https://bio.libretexts.org/Bookshelves/Biochemistry/Fundamentals_of_Biochemistry_(Jakubowski_and_Flatt)/Unit_IV_-_Special_Topics/32%3A_Biochemistry_and_Climate_Change/32.05%3A__Biofuels_B_-_Cellulosic_EthanolThe page discusses the production of cellulosic ethanol as a sustainable biofuel alternative to fossil fuels, highlighting its potential advantages over first-generation biofuels like corn ethanol. It...The page discusses the production of cellulosic ethanol as a sustainable biofuel alternative to fossil fuels, highlighting its potential advantages over first-generation biofuels like corn ethanol. It outlines the biochemical processes involved, including pretreatment and enzymatic hydrolysis using cellulases, and addresses the challenges posed by the complex structure of plant cell walls containing cellulose, hemicellulose, and lignin.
- https://bio.libretexts.org/Bookshelves/Biochemistry/Fundamentals_of_Biochemistry_(Jakubowski_and_Flatt)/01%3A_Unit_I-_Structure_and_Catalysis/06%3A_Enzyme_Activity/6.05B%3A_Quantitative_Analysis_of_Enzyme_Reaction_Mechanisms_-_Serine_ProteasesThis page explores enzyme mechanisms, focusing on serine proteases like chymotrypsin, and how structural, kinetic, and thermodynamic factors influence catalysis. It covers the reaction dynamics, enzym...This page explores enzyme mechanisms, focusing on serine proteases like chymotrypsin, and how structural, kinetic, and thermodynamic factors influence catalysis. It covers the reaction dynamics, enzyme efficiency improvements, and the effects of inhibitors and solvents on enzyme activity. Insights include the importance of conformational flexibility, the effect of nonpolar solvents for catalysis, and thermodynamic factors affecting the stability of bound and transition state analog ligands.
